Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flotillin family protein | CPT03_RS17795 | Not Available | Positive | 4299854 - 4301410 | 56227.5 |
| is4 family transposase | CPT03_RS17800 | Not Available | Negative | 4301485 - 4302708 | 46989.9 |
| gin domain-containing protein | CPT03_RS17805 | Not Available | Negative | 4302887 - 4303492 | 21654.9 |
| had hydrolase-like protein | CPT03_RS17810 | Not Available | Negative | 4303654 - 4304277 | 24000.7 |
| o-methyltransferase | CPT03_RS17815 | Not Available | Negative | 4304288 - 4304953 | 24645.8 |
| gh92 family glycosyl hydrolase | CPT03_RS17820 | Not Available | Positive | 4305048 - 4307219 | 81014.4 |
| amidohydrolase family protein | CPT03_RS17825 | Not Available | Positive | 4307230 - 4309959 | 100630.0 |
| amidohydrolase family protein | CPT03_RS17830 | Not Available | Positive | 4309928 - 4311250 | 47913.8 |
| lrp/asnc ligand binding domain-containing protein | CPT03_RS17835 | Not Available | Positive | 4311783 - 4312256 | 17894.9 |
| tex family protein | CPT03_RS17840 | Not Available | Negative | 4312313 - 4314637 | 85462.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

