Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS17640 | Not Available | Negative | 4272624 - 4273007 | 14240.0 |
| abc transporter permease | CPT03_RS17645 | Not Available | Negative | 4273012 - 4274244 | 45449.0 |
| mbl fold metallo-hydrolase | CPT03_RS17650 | Not Available | Negative | 4274262 - 4274900 | 23995.7 |
| gliding motility lipoprotein gldd | CPT03_RS17655 | Not Available | Negative | 4274921 - 4275508 | 23012.4 |
| shikimate dehydrogenase family protein | CPT03_RS17660 | Not Available | Negative | 4275509 - 4276252 | 27825.3 |
| phosphosulfolactate synthase | CPT03_RS17665 | Not Available | Negative | 4276282 - 4277052 | 28841.8 |
| tetratricopeptide repeat protein | CPT03_RS17670 | Not Available | Negative | 4277121 - 4278524 | 55061.3 |
| nuclear transport factor 2 family protein | CPT03_RS17675 | Not Available | Positive | 4278793 - 4279275 | 18631.6 |
| aldehyde dehydrogenase family protein | CPT03_RS17680 | Not Available | Positive | 4279287 - 4280828 | 55376.3 |
| gin domain-containing protein | CPT03_RS17685 | Not Available | Negative | 4280894 - 4281493 | 21888.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

