Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase family protein | CPT03_RS17590 | Not Available | Positive | 4258542 - 4259699 | 43004.2 |
| m16 family metallopeptidase | CPT03_RS17595 | Not Available | Positive | 4259722 - 4262589 | 106214.0 |
| glycoside hydrolase family 10 protein | CPT03_RS17600 | Not Available | Negative | 4262669 - 4264219 | 59271.2 |
| hypothetical protein | CPT03_RS17605 | Not Available | Positive | 4264407 - 4265315 | 34293.9 |
| sensor histidine kinase | CPT03_RS17610 | Not Available | Negative | 4265307 - 4269026 | 142057.0 |
| acp s-malonyltransferase | CPT03_RS17615 | Not Available | Negative | 4269063 - 4269944 | 31237.7 |
| gtp cyclohydrolase i fole | CPT03_RS17620 | Not Available | Negative | 4269966 - 4270595 | 23696.6 |
| 6-pyruvoyl trahydropterin synthase family protein | CPT03_RS17625 | Not Available | Negative | 4270607 - 4271017 | 15696.5 |
| futalosine hydrolase | CPT03_RS17630 | Not Available | Positive | 4271104 - 4271736 | 23036.9 |
| menaquinone biosynthesis family protein | CPT03_RS17635 | Not Available | Positive | 4271771 - 4272616 | 31689.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

