Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | CPT03_RS17540 | Not Available | Positive | 4245720 - 4246730 | 36601.2 |
| 2fe-2s iron-sulfur cluster-binding protein | CPT03_RS17545 | Not Available | Positive | 4246733 - 4247062 | 11888.3 |
| s41 family peptidase | CPT03_RS17550 | Not Available | Negative | 4247069 - 4248772 | 63097.6 |
| hypothetical protein | CPT03_RS17555 | Not Available | Negative | 4248855 - 4249070 | 8374.14 |
| hypothetical protein | CPT03_RS17560 | Not Available | Negative | 4249165 - 4249614 | 16284.8 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | CPT03_RS17565 | Not Available | Negative | 4249626 - 4251083 | 53279.3 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS17570 | Not Available | Negative | 4251093 - 4254101 | 109382.0 |
| deor/glpr family dna-binding transcription regulator | CPT03_RS17575 | Not Available | Positive | 4254387 - 4255133 | 27548.5 |
| anhydro-n-acetylmuramic acid kinase | CPT03_RS17580 | Not Available | Negative | 4255130 - 4256329 | 43427.2 |
| glucosamine-6-phosphate deaminase | CPT03_RS17585 | Not Available | Positive | 4256558 - 4258477 | 72225.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

