Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor family protein | CPT03_RS17495 | Not Available | Negative | 4235711 - 4237393 | 62799.7 |
| hypothetical protein | CPT03_RS22995 | Not Available | Negative | 4237474 - 4237893 | 15545.7 |
| hypothetical protein | CPT03_RS17500 | Not Available | Negative | 4237959 - 4239155 | 44675.4 |
| sdr family nad(p)-dependent oxidoreductase | CPT03_RS17505 | Not Available | Positive | 4239814 - 4240635 | 28521.1 |
| tlpa family protein disulfide reductase | CPT03_RS17510 | Not Available | Positive | 4240798 - 4242159 | 51384.8 |
| hypothetical protein | CPT03_RS17515 | Not Available | Negative | 4242234 - 4242464 | 8931.51 |
| fic family protein | CPT03_RS17520 | Not Available | Negative | 4242466 - 4243275 | 30742.8 |
| Trna-asp | Not Available | Not Available | Positive | 4243401 - 4243477 | Not Available |
| peptide chain release factor 1 | CPT03_RS17530 | Not Available | Negative | 4243597 - 4244670 | 40128.9 |
| udp-2,3-diacylglucosamine diphosphatase | CPT03_RS17535 | Not Available | Negative | 4244845 - 4245591 | 29330.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

