Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy transducer tonb | CPT03_RS17445 | Not Available | Negative | 4223982 - 4224803 | 30121.3 |
| exbd/tolr family protein | CPT03_RS17450 | Not Available | Negative | 4224832 - 4225365 | 19369.6 |
| biopolymer transporter exbd | CPT03_RS17455 | Not Available | Negative | 4225375 - 4225992 | 22930.1 |
| mota/tolq/exbb proton channel family protein | CPT03_RS17460 | Not Available | Negative | 4226079 - 4226921 | 29754.4 |
| phosphoenolpyruvate carboxykinase (atp) | CPT03_RS17465 | Not Available | Negative | 4227227 - 4228831 | 59283.2 |
| translation initiation factor | CPT03_RS17470 | Not Available | Negative | 4228966 - 4229319 | 12753.4 |
| diacylglycerol/lipid kinase family protein | CPT03_RS17475 | Not Available | Negative | 4229309 - 4230199 | 32471.4 |
| methionine adenosyltransferase | CPT03_RS17480 | Not Available | Positive | 4230434 - 4231684 | 45959.6 |
| hypothetical protein | CPT03_RS17485 | Not Available | Positive | 4231838 - 4232185 | 13226.7 |
| vcbs repeat-containing protein | CPT03_RS17490 | Not Available | Positive | 4232365 - 4235706 | 124541.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

