Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil(1498)-n(3))-methyltransferase | CPT03_RS17340 | Not Available | Negative | 4204720 - 4205424 | 26657.1 |
| hemolysin family protein | CPT03_RS17345 | Not Available | Negative | 4205436 - 4206752 | 49103.2 |
| inorganic diphosphatase | CPT03_RS17350 | Not Available | Negative | 4206752 - 4207306 | 21015.1 |
| deda family protein | CPT03_RS17355 | Not Available | Negative | 4207315 - 4207977 | 25224.3 |
| nadh-quinone oxidoreductase subunit n | CPT03_RS17360 | Not Available | Negative | 4208023 - 4209396 | 50357.0 |
| complex i subunit 4 family protein | CPT03_RS17365 | Not Available | Negative | 4209401 - 4210867 | 53650.3 |
| nadh-quinone oxidoreductase subunit l | CPT03_RS17370 | Not Available | Negative | 4210889 - 4212781 | 68828.7 |
| nadh-quinone oxidoreductase subunit nuok | CPT03_RS17375 | Not Available | Negative | 4212804 - 4213124 | 11789.8 |
| nadh-quinone oxidoreductase subunit j | CPT03_RS17380 | Not Available | Negative | 4213133 - 4213630 | 18027.1 |
| nuoi/complex i 23 kda subunit family protein | CPT03_RS17385 | Not Available | Negative | 4213690 - 4214187 | 18994.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

