Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS17290 | Not Available | Positive | 4196519 - 4197706 | 45365.0 |
| feob-associated cys-rich membrane protein | CPT03_RS17295 | Not Available | Positive | 4197758 - 4197916 | 5655.07 |
| crp/fnr family transcriptional regulator | CPT03_RS17300 | Not Available | Positive | 4197926 - 4198522 | 22940.0 |
| ycei family protein | CPT03_RS17305 | Not Available | Positive | 4198611 - 4199141 | 19066.2 |
| pirin family protein | CPT03_RS17310 | Not Available | Positive | 4199180 - 4200055 | 32288.3 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | CPT03_RS17315 | Not Available | Negative | 4200059 - 4200535 | 17349.2 |
| type ix secretion system outer membrane channel protein porv | CPT03_RS17320 | Not Available | Negative | 4200562 - 4201740 | 42634.2 |
| sumf1/egtb/pvdo family nonheme iron enzyme | CPT03_RS17325 | Not Available | Positive | 4201929 - 4203512 | 59522.7 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | CPT03_RS17330 | Not Available | Negative | 4203567 - 4204064 | 18353.2 |
| duf4159 domain-containing protein | CPT03_RS17335 | Not Available | Negative | 4204067 - 4204723 | 24952.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

