Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | CPT03_RS17240 | Not Available | Positive | 4187377 - 4188126 | 28759.3 |
| 3-ketoacyl-acp reductase | CPT03_RS17245 | Not Available | Negative | 4188135 - 4188851 | 25254.6 |
| translational gtpase typa | CPT03_RS17250 | Not Available | Negative | 4189017 - 4190822 | 67378.5 |
| hypothetical protein | CPT03_RS17255 | Not Available | Positive | 4190949 - 4191158 | 8010.91 |
| nad-dependent epimerase/dehydratase family protein | CPT03_RS17260 | Not Available | Positive | 4191169 - 4191825 | 24449.9 |
| alpha/beta hydrolase | CPT03_RS17265 | Not Available | Negative | 4191829 - 4192650 | 31013.1 |
| esterase family protein | CPT03_RS17270 | Not Available | Positive | 4192823 - 4193527 | 27313.4 |
| atp-grasp domain-containing protein | CPT03_RS17275 | Not Available | Positive | 4193557 - 4194552 | 37750.8 |
| carboxylate-amine ligase | CPT03_RS17280 | Not Available | Positive | 4194580 - 4195686 | 42399.7 |
| type 1 glutamine amidotransferase | CPT03_RS17285 | Not Available | Positive | 4195683 - 4196516 | 32070.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

