Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2480 family protein | CPT03_RS17140 | Not Available | Negative | 4166381 - 4166896 | 19295.4 |
| sura n-terminal domain-containing protein | CPT03_RS17145 | Not Available | Negative | 4166960 - 4169056 | 75795.3 |
| hypothetical protein | CPT03_RS17150 | Not Available | Negative | 4169184 - 4169756 | 21037.3 |
| hypothetical protein | CPT03_RS17155 | Not Available | Negative | 4169756 - 4171069 | 48127.3 |
| type iii pantothenate kinase | CPT03_RS17160 | Not Available | Negative | 4171032 - 4171787 | 28362.9 |
| duf6427 family protein | CPT03_RS17165 | Not Available | Negative | 4171868 - 4172848 | 38365.3 |
| glycosyltransferase family protein | CPT03_RS17170 | Not Available | Negative | 4172878 - 4173864 | 37622.4 |
| udp-2,3-diacylglucosamine diphosphatase | CPT03_RS17175 | Not Available | Negative | 4173894 - 4174745 | 32781.6 |
| yfho family protein | CPT03_RS17180 | Not Available | Negative | 4174969 - 4177452 | 92025.8 |
| duf4834 family protein | CPT03_RS17185 | Not Available | Negative | 4177537 - 4177797 | 10048.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

