Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | CPT03_RS17040 | Not Available | Negative | 4142650 - 4143996 | 50194.3 |
| atp-binding cassette domain-containing protein | CPT03_RS17045 | Not Available | Negative | 4144009 - 4146276 | 83949.1 |
| helix-turn-helix transcriptional regulator | CPT03_RS17050 | Not Available | Positive | 4146471 - 4147418 | 36280.4 |
| aminopeptidase p family protein | CPT03_RS17055 | Not Available | Positive | 4147615 - 4149390 | 66177.8 |
| sdr family oxidoreductase | CPT03_RS17060 | Not Available | Negative | 4149571 - 4150353 | 27515.9 |
| amidohydrolase family protein | CPT03_RS17065 | Not Available | Negative | 4150361 - 4151194 | 31827.7 |
| fumarylacetoacetate hydrolase family protein | CPT03_RS17070 | Not Available | Negative | 4151181 - 4152038 | 31345.1 |
| sdr family nad(p)-dependent oxidoreductase | CPT03_RS17075 | Not Available | Negative | 4152067 - 4152831 | 26846.2 |
| uxaa family hydrolase | CPT03_RS17080 | Not Available | Negative | 4152842 - 4154500 | 60013.4 |
| l-rhamnose mutarotase | CPT03_RS17085 | Not Available | Negative | 4154500 - 4154835 | 13085.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

