Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein j | CPT03_RS16990 | Not Available | Negative | 4132077 - 4132439 | 13365.6 |
| hypothetical protein | CPT03_RS16995 | Not Available | Negative | 4132427 - 4133659 | 45812.5 |
| hypothetical protein | CPT03_RS17000 | Not Available | Negative | 4133659 - 4134342 | 25630.6 |
| toxin-antitoxin system ywqk family antitoxin | CPT03_RS17005 | Not Available | Negative | 4134359 - 4134979 | 23810.6 |
| hypothetical protein | CPT03_RS17010 | Not Available | Negative | 4134976 - 4135476 | 18590.5 |
| hypothetical protein | CPT03_RS17015 | Not Available | Negative | 4135480 - 4136430 | 35797.3 |
| hypothetical protein | CPT03_RS17020 | Not Available | Negative | 4136530 - 4137147 | 22614.0 |
| hypothetical protein | CPT03_RS17025 | Not Available | Negative | 4137169 - 4137516 | 13085.2 |
| efflux rnd transporter permease subunit | CPT03_RS17030 | Not Available | Negative | 4138128 - 4141502 | 125113.0 |
| efflux rnd transporter periplasmic adaptor subunit | CPT03_RS17035 | Not Available | Negative | 4141532 - 4142632 | 39942.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

