Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat domain-containing protein | CPT03_RS16895 | Not Available | Negative | 4113601 - 4115568 | 73326.7 |
| duf6443 domain-containing protein | CPT03_RS16900 | Not Available | Negative | 4115565 - 4117010 | 53975.9 |
| hypothetical protein | CPT03_RS16905 | Not Available | Negative | 4117048 - 4120626 | 133252.0 |
| hypothetical protein | CPT03_RS16910 | Not Available | Negative | 4120874 - 4121347 | 17282.8 |
| hypothetical protein | CPT03_RS16915 | Not Available | Negative | 4121335 - 4121625 | 10174.2 |
| tail fiber protein | CPT03_RS16920 | Not Available | Negative | 4121627 - 4122304 | 24581.8 |
| hypothetical protein | CPT03_RS16925 | Not Available | Negative | 4122413 - 4122778 | 13739.2 |
| hypothetical protein | CPT03_RS16930 | Not Available | Negative | 4122817 - 4123713 | 32987.8 |
| hypothetical protein | CPT03_RS16935 | Not Available | Negative | 4123720 - 4124610 | 33382.8 |
| hypothetical protein | CPT03_RS16940 | Not Available | Negative | 4124692 - 4125333 | 23405.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

