Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | CPT03_RS01655 | Not Available | Positive | 424578 - 425453 | 32054.9 |
| smp-30/gluconolactonase/lre family protein | CPT03_RS01660 | Not Available | Positive | 425629 - 426591 | 35525.4 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | CPT03_RS01665 | Not Available | Positive | 426567 - 427190 | 21836.7 |
| galactonate dehydratase | CPT03_RS01670 | Not Available | Positive | 427194 - 428342 | 42798.5 |
| mfs transporter | CPT03_RS01675 | Not Available | Positive | 428306 - 429622 | 48392.9 |
| 2-dehydro-3-deoxygalactonokinase | CPT03_RS01680 | Not Available | Positive | 429622 - 430581 | 35206.1 |
| rna polymerase sigma-70 factor | CPT03_RS01685 | Not Available | Positive | 430813 - 431397 | 22581.3 |
| chromate resistance protein chrb domain-containing protein | CPT03_RS01695 | Not Available | Positive | 431757 - 432596 | 32043.4 |
| hypothetical protein | CPT03_RS01700 | Not Available | Positive | 432659 - 433177 | 18229.0 |
| chromate transporter | CPT03_RS01705 | Not Available | Positive | 433180 - 434349 | 42136.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

