Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS16845 | Not Available | Negative | 4101200 - 4104769 | 134052.0 |
| hypothetical protein | CPT03_RS16850 | Not Available | Negative | 4104783 - 4105676 | 33492.2 |
| hypothetical protein | CPT03_RS16855 | Not Available | Negative | 4105687 - 4106673 | 35012.7 |
| hypothetical protein | CPT03_RS16860 | Not Available | Negative | 4106750 - 4107307 | 20687.0 |
| piln domain-containing protein | CPT03_RS16865 | Not Available | Negative | 4107316 - 4108533 | 45578.0 |
| type ii secretion system protein gspd | CPT03_RS16870 | Not Available | Negative | 4108535 - 4110475 | 71435.1 |
| gspe/pule family protein | CPT03_RS16875 | Not Available | Negative | 4110475 - 4111908 | 53586.6 |
| hypothetical protein | CPT03_RS16880 | Not Available | Negative | 4111921 - 4112436 | 19884.3 |
| type iv pilin protein | CPT03_RS16885 | Not Available | Negative | 4112436 - 4112855 | 15543.0 |
| hypothetical protein | CPT03_RS16890 | Not Available | Negative | 4112933 - 4113592 | 25384.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

