Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | CPT03_RS16755 | Not Available | Negative | 4080538 - 4081221 | 26501.6 |
| atp-grasp domain-containing protein | CPT03_RS16760 | Not Available | Negative | 4081227 - 4082417 | 43466.6 |
| pseudaminic acid cytidylyltransferase | CPT03_RS16765 | Not Available | Negative | 4082410 - 4083108 | 26726.6 |
| udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminase | CPT03_RS16770 | Not Available | Negative | 4083101 - 4084288 | 44423.9 |
| udp-n-acetylglucosamine 4,6-dehydratase (inverting) | CPT03_RS16775 | Not Available | Negative | 4084288 - 4085304 | 37921.8 |
| lipopolysaccharide biosynthesis protein | CPT03_RS16780 | Not Available | Negative | 4085326 - 4086393 | 39874.8 |
| slbb domain-containing protein | CPT03_RS16785 | Not Available | Negative | 4086430 - 4089000 | 95574.2 |
| gdp-mannose 4,6-dehydratase | CPT03_RS16790 | Not Available | Negative | 4089027 - 4090163 | 43067.6 |
| hypothetical protein | CPT03_RS16795 | Not Available | Negative | 4090344 - 4091042 | 26674.8 |
| hypothetical protein | CPT03_RS16800 | Not Available | Negative | 4091076 - 4091396 | 11861.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

