Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1972 domain-containing protein | CPT03_RS16655 | Not Available | Positive | 4057311 - 4058420 | 41734.6 |
| capsule assembly wzi family protein | CPT03_RS16660 | Not Available | Positive | 4058432 - 4060093 | 62897.4 |
| slbb domain-containing protein | CPT03_RS16665 | Not Available | Positive | 4060134 - 4062470 | 86270.3 |
| hypothetical protein | CPT03_RS16670 | Not Available | Positive | 4062472 - 4063515 | 38596.2 |
| capsule assembly wzi family protein | CPT03_RS16675 | Not Available | Negative | 4063516 - 4065207 | 63921.7 |
| capsule assembly wzi family protein | CPT03_RS16680 | Not Available | Negative | 4065219 - 4066892 | 63694.9 |
| hypothetical protein | CPT03_RS16685 | Not Available | Negative | 4066889 - 4067527 | 23683.0 |
| mray family glycosyltransferase | CPT03_RS16690 | Not Available | Negative | 4067649 - 4068797 | 41261.7 |
| lipopolysaccharide biosynthesis protein | CPT03_RS16695 | Not Available | Negative | 4068919 - 4069911 | 38833.1 |
| nad-dependent epimerase/dehydratase family protein | CPT03_RS16700 | Not Available | Negative | 4069911 - 4071047 | 41858.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

