Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein | CPT03_RS16605 | Not Available | Positive | 4047301 - 4048575 | 48146.6 |
| glycosyltransferase family 2 protein | CPT03_RS16610 | Not Available | Positive | 4048553 - 4049506 | 36639.2 |
| nad-dependent epimerase/dehydratase family protein | CPT03_RS16615 | Not Available | Negative | 4049503 - 4050438 | 35061.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | CPT03_RS16620 | Not Available | Negative | 4050441 - 4050986 | 20824.7 |
| nad-dependent epimerase/dehydratase family protein | CPT03_RS16625 | Not Available | Negative | 4050983 - 4051990 | 37672.1 |
| sugar phosphate nucleotidyltransferase | CPT03_RS16630 | Not Available | Negative | 4052000 - 4052785 | 29970.7 |
| hypothetical protein | CPT03_RS16635 | Not Available | Positive | 4052899 - 4054257 | 50648.6 |
| glycosyltransferase family 4 protein | CPT03_RS16640 | Not Available | Positive | 4054250 - 4055362 | 42425.6 |
| acyltransferase | CPT03_RS23300 | Not Available | Positive | 4055403 - 4056095 | 25326.8 |
| glycosyltransferase family 4 protein | CPT03_RS16650 | Not Available | Positive | 4056098 - 4057294 | 44713.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

