Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine o-acetyltransferase | CPT03_RS16555 | Not Available | Negative | 4035190 - 4035762 | 21496.1 |
| hypothetical protein | CPT03_RS16560 | Not Available | Negative | 4035808 - 4037001 | 45689.9 |
| acyltransferase | CPT03_RS16565 | Not Available | Negative | 4036998 - 4037558 | 20339.1 |
| oligosaccharide flippase family protein | CPT03_RS16570 | Not Available | Negative | 4037565 - 4039025 | 55435.5 |
| glycosyltransferase family 4 protein | CPT03_RS16575 | Not Available | Negative | 4039026 - 4040213 | 44853.0 |
| nucleotide sugar dehydrogenase | CPT03_RS16580 | Not Available | Negative | 4040323 - 4041624 | 48011.7 |
| gumc family protein | CPT03_RS16585 | Not Available | Negative | 4041637 - 4044039 | 89415.8 |
| polysaccharide biosynthesis/export family protein | CPT03_RS16590 | Not Available | Negative | 4044049 - 4044825 | 28482.6 |
| tyrosine-protein phosphatase | CPT03_RS16595 | Not Available | Positive | 4045030 - 4045758 | 27787.3 |
| undecaprenyl-phosphate glucose phosphotransferase | CPT03_RS16600 | Not Available | Negative | 4045765 - 4047156 | 53378.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

