Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | CPT03_RS16505 | Not Available | Negative | 4021934 - 4022881 | 35217.5 |
| glycosyltransferase family 4 protein | CPT03_RS16510 | Not Available | Negative | 4022878 - 4024047 | 44589.2 |
| alginate lyase family protein | CPT03_RS16515 | Not Available | Negative | 4024051 - 4025475 | 54676.7 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | CPT03_RS16520 | Not Available | Negative | 4025646 - 4026737 | 40492.1 |
| bi-domain-containing oxidoreductase | CPT03_RS16525 | Not Available | Negative | 4026774 - 4028894 | 76632.4 |
| hypothetical protein | CPT03_RS16530 | Not Available | Negative | 4028902 - 4030239 | 51810.8 |
| hypothetical protein | CPT03_RS16535 | Not Available | Negative | 4030265 - 4030978 | 27006.3 |
| hypothetical protein | CPT03_RS16540 | Not Available | Negative | 4031215 - 4032660 | 54927.1 |
| hypothetical protein | CPT03_RS16545 | Not Available | Negative | 4032678 - 4033799 | 42342.1 |
| glycosyltransferase family 4 protein | CPT03_RS16550 | Not Available | Negative | 4034022 - 4035197 | 44049.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

