Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | CPT03_RS16450 | Not Available | Negative | 4009406 - 4010245 | 31294.2 |
| glycoside hydrolase family 130 protein | CPT03_RS16455 | Not Available | Positive | 4010369 - 4011502 | 41709.7 |
| hypothetical protein | CPT03_RS16460 | Not Available | Negative | 4011597 - 4012400 | 30810.2 |
| group ii intron reverse transcriptase/maturase | CPT03_RS16465 | Not Available | Negative | 4012501 - 4013775 | 48965.7 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | CPT03_RS16470 | Not Available | Negative | 4014399 - 4016237 | 67394.2 |
| hypothetical protein | CPT03_RS16480 | Not Available | Negative | 4016543 - 4016728 | 7010.55 |
| gntr family transcriptional regulator | CPT03_RS16485 | Not Available | Positive | 4016922 - 4018403 | 56536.8 |
| polysaccharide biosynthesis protein | CPT03_RS16490 | Not Available | Negative | 4018400 - 4020337 | 72740.0 |
| transferase | CPT03_RS16495 | Not Available | Negative | 4020434 - 4020985 | 19770.0 |
| mray family glycosyltransferase | CPT03_RS16500 | Not Available | Negative | 4020985 - 4021929 | 35623.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

