Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| feoa family protein | CPT03_RS16255 | Not Available | Negative | 3959496 - 3959711 | 7778.67 |
| vanz family protein | CPT03_RS16260 | Not Available | Negative | 3959913 - 3960317 | 15613.3 |
| glycine cleavage system protein gcvh | CPT03_RS16265 | Not Available | Negative | 3960321 - 3960701 | 13795.1 |
| cell surface protein spra | CPT03_RS16270 | Not Available | Negative | 3960800 - 3967954 | 268901.0 |
| holliday junction branch migration protein ruva | CPT03_RS16275 | Not Available | Negative | 3968027 - 3968611 | 20992.7 |
| nadp-dependent malic enzyme | CPT03_RS16280 | Not Available | Negative | 3968615 - 3970927 | 84677.1 |
| lytic transglycosylase domain-containing protein | CPT03_RS16285 | Not Available | Negative | 3971067 - 3972278 | 46219.6 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | CPT03_RS16290 | Not Available | Negative | 3972325 - 3973755 | 51871.8 |
| twin-arginine translocase tata/tate family subunit | CPT03_RS16295 | Not Available | Negative | 3973792 - 3973995 | 7240.05 |
| twin-arginine translocase tata/tate family subunit | CPT03_RS16300 | Not Available | Negative | 3974006 - 3974398 | 14441.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

