Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-dependent enzyme | CPT03_RS16205 | Not Available | Positive | 3940974 - 3942950 | 73313.0 |
| two-component regulator propeller domain-containing protein | CPT03_RS16210 | Not Available | Negative | 3942981 - 3947036 | 153980.0 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS23255 | Not Available | Positive | 3947185 - 3948576 | 49590.0 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS23260 | Not Available | Positive | 3948543 - 3950462 | 70991.4 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS16225 | Not Available | Positive | 3950473 - 3952218 | 65492.0 |
| right-handed parallel beta-helix repeat-containing protein | CPT03_RS16230 | Not Available | Positive | 3952308 - 3953756 | 53998.2 |
| glycoside hydrolase family 2 protein | CPT03_RS16235 | Not Available | Positive | 3953836 - 3955893 | 78457.4 |
| hypothetical protein | CPT03_RS16240 | Not Available | Positive | 3955985 - 3956794 | 30177.9 |
| sprt-like domain-containing protein | CPT03_RS16245 | Not Available | Negative | 3956743 - 3957327 | 22275.8 |
| ferrous iron transport protein b | CPT03_RS16250 | Not Available | Negative | 3957376 - 3959490 | 78220.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

