Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yced family protein | CPT03_RS16155 | Not Available | Positive | 3931582 - 3932115 | 20301.3 |
| 50s ribosomal protein l32 | CPT03_RS16160 | Not Available | Positive | 3932134 - 3932325 | 7110.46 |
| phosphate acyltransferase plsx | CPT03_RS16165 | Not Available | Positive | 3932424 - 3933365 | 33375.7 |
| beta-ketoacyl-acp synthase iii | CPT03_RS16170 | Not Available | Positive | 3933375 - 3934364 | 35894.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | CPT03_RS16175 | Not Available | Positive | 3934516 - 3934992 | 17032.5 |
| acetyl-coa carboxylase biotin carboxylase subunit | CPT03_RS16180 | Not Available | Positive | 3935112 - 3936452 | 49535.3 |
| twin-arginine translocase subunit tatc | CPT03_RS16185 | Not Available | Positive | 3936534 - 3937418 | 33182.7 |
| ribose 5-phosphate isomerase b | CPT03_RS16190 | Not Available | Positive | 3937457 - 3937894 | 15790.6 |
| m28 family peptidase | CPT03_RS16195 | Not Available | Positive | 3937940 - 3939541 | 58443.6 |
| lutb/lldf family l-lactate oxidation iron-sulfur protein | CPT03_RS16200 | Not Available | Positive | 3939583 - 3940971 | 52474.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

