Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glxa family transcriptional regulator | CPT03_RS15960 | Not Available | Negative | 3887979 - 3888956 | 36691.5 |
| rna polymerase sigma-70 factor | CPT03_RS15965 | Not Available | Positive | 3889203 - 3889787 | 22865.8 |
| fecr family protein | CPT03_RS15970 | Not Available | Positive | 3889885 - 3890883 | 37773.6 |
| carboxypeptidase-like regulatory domain-containing protein | CPT03_RS22990 | Not Available | Positive | 3891122 - 3891796 | 24234.5 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS15975 | Not Available | Positive | 3891834 - 3894464 | 97154.0 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS15980 | Not Available | Positive | 3894481 - 3896076 | 60282.8 |
| alkaline phosphatase | CPT03_RS15985 | Not Available | Positive | 3896272 - 3898143 | 68516.2 |
| gnat family n-acetyltransferase | CPT03_RS15990 | Not Available | Negative | 3898180 - 3898857 | 25558.6 |
| alpha-l-rhamnosidase c-terminal domain-containing protein | CPT03_RS15995 | Not Available | Positive | 3898901 - 3901186 | 85696.8 |
| hypothetical protein | CPT03_RS16000 | Not Available | Negative | 3901549 - 3901797 | 8657.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

