Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dash family cryptochrome | CPT03_RS15815 | Not Available | Negative | 3832606 - 3833898 | 49132.0 |
| tigr01777 family oxidoreductase | CPT03_RS15820 | Not Available | Positive | 3834056 - 3834961 | 33514.6 |
| cryptochrome/photolyase family protein | CPT03_RS15825 | Not Available | Positive | 3834961 - 3836265 | 50937.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CPT03_RS15830 | Not Available | Negative | 3836291 - 3837208 | 33185.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CPT03_RS15835 | Not Available | Negative | 3837216 - 3837707 | 18083.0 |
| acyl-coa dehydrogenase family protein | CPT03_RS15840 | Not Available | Negative | 3837842 - 3839632 | 65761.3 |
| hypothetical protein | CPT03_RS15845 | Not Available | Negative | 3839645 - 3840822 | 43293.3 |
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein | CPT03_RS15850 | Not Available | Negative | 3840846 - 3843209 | 87129.2 |
| marr family winged helix-turn-helix transcriptional regulator | CPT03_RS15855 | Not Available | Negative | 3843257 - 3843712 | 16936.4 |
| duf6089 family protein | CPT03_RS15860 | Not Available | Negative | 3843845 - 3845179 | 47628.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

