Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | CPT03_RS15765 | Not Available | Positive | 3816324 - 3817391 | 38310.0 |
| efflux rnd transporter permease subunit | CPT03_RS15770 | Not Available | Positive | 3817438 - 3820626 | 115732.0 |
| hypothetical protein | CPT03_RS15775 | Not Available | Positive | 3820732 - 3821553 | 30741.8 |
| dihydrolipoyl dehydrogenase | CPT03_RS15780 | Not Available | Negative | 3821590 - 3822996 | 50062.7 |
| coce/nond family hydrolase | CPT03_RS15785 | Not Available | Positive | 3823111 - 3824988 | 71390.3 |
| m1 family metallopeptidase | CPT03_RS15790 | Not Available | Positive | 3824993 - 3826648 | 63588.4 |
| head gin domain-containing protein | CPT03_RS15795 | Not Available | Positive | 3826711 - 3827439 | 24847.3 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | CPT03_RS15800 | Not Available | Negative | 3827510 - 3828742 | 43559.7 |
| 2-oxoglutarate dehydrogenase e1 component | CPT03_RS15805 | Not Available | Negative | 3828762 - 3831557 | 105723.0 |
| merr family transcriptional regulator | CPT03_RS15810 | Not Available | Negative | 3831624 - 3832502 | 33201.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

