Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 3808638 - 3808714 | Not Available |
| pfkb family carbohydrate kinase | CPT03_RS15720 | Not Available | Positive | 3808855 - 3809775 | 33861.8 |
| cytochrome b5 domain-containing protein | CPT03_RS15725 | Not Available | Negative | 3809821 - 3810057 | 9123.83 |
| lycopene cyclase domain-containing protein | CPT03_RS15730 | Not Available | Negative | 3810057 - 3810728 | 25824.8 |
| srpbcc family protein | CPT03_RS15735 | Not Available | Positive | 3810868 - 3811398 | 19850.9 |
| rna polymerase sigma factor | CPT03_RS15740 | Not Available | Negative | 3811649 - 3812179 | 20215.3 |
| udp-n-acetylmuramate dehydrogenase | CPT03_RS15745 | Not Available | Negative | 3812349 - 3813365 | 36834.2 |
| tetr/acrr family transcriptional regulator | CPT03_RS15750 | Not Available | Positive | 3813550 - 3814155 | 23109.3 |
| tetr/acrr family transcriptional regulator | CPT03_RS15755 | Not Available | Positive | 3814351 - 3814956 | 23142.2 |
| tolc family protein | CPT03_RS15760 | Not Available | Positive | 3814978 - 3816321 | 49908.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

