Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase family protein | CPT03_RS15670 | Not Available | Negative | 3799120 - 3800103 | 37606.5 |
| alpha-e domain-containing protein | CPT03_RS15675 | Not Available | Negative | 3800122 - 3801057 | 36476.4 |
| circularly permuted type 2 atp-grasp protein | CPT03_RS15680 | Not Available | Negative | 3801070 - 3802512 | 54396.6 |
| nucleotidyl transferase abieii/abigii toxin family protein | CPT03_RS15685 | Not Available | Negative | 3803368 - 3804228 | 33061.8 |
| type iv toxin-antitoxin system abiei family antitoxin domain-containing protein | CPT03_RS15690 | Not Available | Negative | 3804225 - 3804863 | 23584.8 |
| hypothetical protein | CPT03_RS22830 | Not Available | Positive | 3805068 - 3805208 | 5289.53 |
| transposase | CPT03_RS15695 | Not Available | Negative | 3805704 - 3806687 | 38267.1 |
| transposase | CPT03_RS15700 | Not Available | Negative | 3806680 - 3807033 | 13470.4 |
| transposase | CPT03_RS15705 | Not Available | Negative | 3807161 - 3808144 | 37470.0 |
| transposase | CPT03_RS15710 | Not Available | Negative | 3808125 - 3808490 | 14348.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

