Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS15565 | Not Available | Negative | 3780359 - 3782149 | 69240.2 |
| yoak family protein | CPT03_RS15570 | Not Available | Negative | 3782422 - 3783117 | 25749.2 |
| methyltransferase domain-containing protein | CPT03_RS15575 | Not Available | Positive | 3783302 - 3783898 | 22578.6 |
| hypothetical protein | CPT03_RS15580 | Not Available | Positive | 3783949 - 3784170 | 8222.91 |
| crp/fnr family transcriptional regulator | CPT03_RS15585 | Not Available | Positive | 3784231 - 3784938 | 26544.1 |
| glycoside hydrolase family 55 protein | CPT03_RS15590 | Not Available | Negative | 3784963 - 3787830 | 103835.0 |
| aaa family atpase | CPT03_RS15595 | Not Available | Negative | 3788146 - 3790488 | 87719.2 |
| hypothetical protein | CPT03_RS15600 | Not Available | Negative | 3790469 - 3790672 | 7344.74 |
| hypothetical protein | CPT03_RS22825 | Not Available | Positive | 3790982 - 3791374 | 15653.9 |
| helix-turn-helix domain-containing protein | CPT03_RS15610 | Not Available | Negative | 3791413 - 3791880 | 17749.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

