Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | CPT03_RS15470 | Not Available | Negative | 3753563 - 3754330 | 29149.4 |
| single-stranded-dna-specific exonuclease recj | CPT03_RS15475 | Not Available | Positive | 3754478 - 3756190 | 63792.6 |
| lps export abc transporter atp-binding protein | CPT03_RS15480 | Not Available | Positive | 3756191 - 3756925 | 27358.2 |
| gh3 auxin-responsive promoter family protein | CPT03_RS15485 | Not Available | Positive | 3756946 - 3758457 | 58480.7 |
| cbs domain-containing protein | CPT03_RS15490 | Not Available | Positive | 3758551 - 3758979 | 16063.8 |
| m13 family metallopeptidase | CPT03_RS15495 | Not Available | Negative | 3759084 - 3761123 | 75811.6 |
| hypothetical protein | CPT03_RS22820 | Not Available | Negative | 3761247 - 3761480 | 8997.72 |
| metallophosphoesterase family protein | CPT03_RS15500 | Not Available | Positive | 3761671 - 3762792 | 42097.3 |
| sterol desaturase family protein | CPT03_RS15505 | Not Available | Positive | 3762903 - 3763781 | 34500.0 |
| alpha/beta hydrolase | CPT03_RS15510 | Not Available | Positive | 3763783 - 3764640 | 32497.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

