Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc oxidoreductase | CPT03_RS15270 | Not Available | Positive | 3707267 - 3708970 | 63704.2 |
| gfo/idh/moca family protein | CPT03_RS15275 | Not Available | Positive | 3708970 - 3710130 | 42482.1 |
| sugar phosphate isomerase/epimerase family protein | CPT03_RS15280 | Not Available | Positive | 3710139 - 3711197 | 39681.7 |
| c-type cytochrome | CPT03_RS15285 | Not Available | Positive | 3711205 - 3711690 | 16380.6 |
| gfo/idh/moca family protein | CPT03_RS15290 | Not Available | Positive | 3711717 - 3713174 | 53558.6 |
| duf1080 domain-containing protein | CPT03_RS15295 | Not Available | Positive | 3713203 - 3713898 | 25657.3 |
| nucleoside permease | CPT03_RS15300 | Not Available | Positive | 3713931 - 3715172 | 45489.3 |
| hydroxypyruvate isomerase family protein | CPT03_RS15305 | Not Available | Positive | 3715211 - 3716092 | 32440.0 |
| sugar phosphate isomerase/epimerase family protein | CPT03_RS15310 | Not Available | Positive | 3716103 - 3716984 | 32480.7 |
| aspartate-semialdehyde dehydrogenase | CPT03_RS15315 | Not Available | Positive | 3717167 - 3718159 | 36311.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

