Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lamg domain-containing protein | CPT03_RS15220 | Not Available | Positive | 3694942 - 3695799 | 30984.9 |
| glucoamylase family protein | CPT03_RS15225 | Not Available | Positive | 3695880 - 3697556 | 61725.6 |
| glucoamylase family protein | CPT03_RS15230 | Not Available | Positive | 3697598 - 3698950 | 51394.8 |
| family 43 glycosylhydrolase | CPT03_RS15235 | Not Available | Positive | 3698954 - 3700702 | 66877.6 |
| gdsl-type esterase/lipase family protein | CPT03_RS15240 | Not Available | Positive | 3700715 - 3701380 | 25578.8 |
| beta-glucosidase bglx | CPT03_RS15245 | Not Available | Positive | 3701390 - 3703687 | 84349.2 |
| prolyl oligopeptidase family serine peptidase | CPT03_RS15250 | Not Available | Positive | 3703793 - 3704575 | 29579.6 |
| yebc/pmpr family dna-binding transcriptional regulator | CPT03_RS15255 | Not Available | Negative | 3704597 - 3705322 | 27208.0 |
| nad-dependent epimerase/dehydratase family protein | CPT03_RS15260 | Not Available | Negative | 3705374 - 3706318 | 35455.3 |
| gluconate 2-dehydrogenase subunit 3 family protein | CPT03_RS15265 | Not Available | Positive | 3706586 - 3707248 | 23966.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

