Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | CPT03_RS15170 | Not Available | Negative | 3678601 - 3679638 | 39102.8 |
| glycine c-acetyltransferase | CPT03_RS15175 | Not Available | Negative | 3679742 - 3680929 | 43383.3 |
| duf5686 and carboxypeptidase regulatory-like domain-containing protein | CPT03_RS15180 | Not Available | Positive | 3681073 - 3683520 | 93178.7 |
| hypothetical protein | CPT03_RS15185 | Not Available | Negative | 3683525 - 3684172 | 24854.6 |
| rna polymerase sigma factor | CPT03_RS15190 | Not Available | Negative | 3684185 - 3684691 | 19897.1 |
| aminopeptidase c | CPT03_RS15195 | Not Available | Negative | 3684840 - 3686018 | 43783.5 |
| rhodanese-related sulfurtransferase | CPT03_RS15200 | Not Available | Positive | 3686328 - 3687275 | 35445.2 |
| triple tyrosine motif-containing protein | CPT03_RS15205 | Not Available | Positive | 3687282 - 3690173 | 110488.0 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS15210 | Not Available | Positive | 3690423 - 3693428 | 108777.0 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS15215 | Not Available | Positive | 3693440 - 3694930 | 54740.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

