Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS15120 | Not Available | Negative | 3670708 - 3671622 | 34111.9 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | CPT03_RS15125 | Not Available | Negative | 3671619 - 3672239 | 24217.1 |
| phosphoribosyltransferase family protein | CPT03_RS15130 | Not Available | Negative | 3672278 - 3672787 | 19288.8 |
| head gin domain-containing protein | CPT03_RS15135 | Not Available | Positive | 3672947 - 3673657 | 24994.3 |
| serine hydrolase domain-containing protein | CPT03_RS15140 | Not Available | Positive | 3673777 - 3675453 | 63212.2 |
| hypothetical protein | CPT03_RS15145 | Not Available | Negative | 3675454 - 3675861 | 15434.5 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | CPT03_RS15150 | Not Available | Negative | 3675863 - 3677332 | 55254.0 |
| phenylalanyl-trna synthetase subunit alpha | CPT03_RS15155 | Not Available | Negative | 3677424 - 3677534 | 4114.14 |
| tetr/acrr family transcriptional regulator | CPT03_RS15160 | Not Available | Negative | 3677616 - 3678191 | 22212.8 |
| hypothetical protein | CPT03_RS15165 | Not Available | Negative | 3678191 - 3678601 | 14593.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

