Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hesb/isca family protein | CPT03_RS15070 | Not Available | Positive | 3660813 - 3661166 | 12812.1 |
| hypothetical protein | CPT03_RS15075 | Not Available | Positive | 3661260 - 3662491 | 43941.1 |
| dtdp-glucose 4,6-dehydratase | CPT03_RS15080 | Not Available | Negative | 3662507 - 3663559 | 39739.4 |
| hypothetical protein | CPT03_RS15085 | Not Available | Negative | 3663563 - 3664129 | 21894.8 |
| udp-glucose 4-epimerase gale | CPT03_RS15090 | Not Available | Negative | 3664131 - 3665153 | 37336.3 |
| udp-glucuronic acid decarboxylase family protein | CPT03_RS15095 | Not Available | Negative | 3665159 - 3666148 | 37242.8 |
| udp-glucose dehydrogenase family protein | CPT03_RS15100 | Not Available | Negative | 3666148 - 3667458 | 47960.0 |
| 3-deoxy-d-manno-octulosonic acid transferase | CPT03_RS15105 | Not Available | Positive | 3667520 - 3668734 | 45798.9 |
| ferrochelatase | CPT03_RS15110 | Not Available | Negative | 3668731 - 3669744 | 38320.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CPT03_RS15115 | Not Available | Negative | 3669807 - 3670655 | 32260.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

