Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | CPT03_RS15020 | Not Available | Negative | 3651694 - 3652149 | 17327.6 |
| nad(p)/fad-dependent oxidoreductase | CPT03_RS15025 | Not Available | Negative | 3652180 - 3653721 | 55922.5 |
| lema family protein | CPT03_RS15030 | Not Available | Positive | 3653997 - 3654578 | 21235.5 |
| tpm domain-containing protein | CPT03_RS15035 | Not Available | Positive | 3654663 - 3655106 | 16087.0 |
| tpm domain-containing protein | CPT03_RS15040 | Not Available | Positive | 3655110 - 3655880 | 26257.6 |
| hypothetical protein | CPT03_RS15045 | Not Available | Positive | 3655886 - 3656284 | 15317.6 |
| nudix hydrolase | CPT03_RS15050 | Not Available | Positive | 3656286 - 3656837 | 20977.0 |
| chromosomal replication initiator protein dnaa | CPT03_RS15055 | Not Available | Negative | 3656911 - 3658341 | 53949.2 |
| methylmalonyl-coa mutase | CPT03_RS15060 | Not Available | Negative | 3658536 - 3660083 | 57068.9 |
| hypothetical protein | CPT03_RS15065 | Not Available | Negative | 3660086 - 3660631 | 20426.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

