Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 3642538 - 3642614 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 3642627 - 3642704 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3642818 - 3644338 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3645310 - 3645421 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3645507 - 3645618 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3645726 - 3648602 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3648828 - 3648904 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 3648917 - 3648994 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3649108 - 3650629 | Not Available |
| coa-binding protein | CPT03_RS15015 | Not Available | Negative | 3651331 - 3651690 | 13229.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

