Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod/siga | CPT03_RS14815 | Not Available | Negative | 3604557 - 3605417 | 32851.6 |
| lrp/asnc family transcriptional regulator | CPT03_RS14820 | Not Available | Positive | 3605657 - 3606136 | 18173.0 |
| leucine--trna ligase | CPT03_RS14825 | Not Available | Negative | 3606184 - 3608982 | 107288.0 |
| chloride channel protein | CPT03_RS14830 | Not Available | Negative | 3609046 - 3610308 | 45038.4 |
| cell division protein ftsx | CPT03_RS14835 | Not Available | Positive | 3610570 - 3611448 | 32558.6 |
| duf3098 domain-containing protein | CPT03_RS14840 | Not Available | Positive | 3611448 - 3611672 | 8298.52 |
| undecaprenyl-diphosphate phosphatase | CPT03_RS14845 | Not Available | Positive | 3611681 - 3612475 | 29273.9 |
| trna pseudouridine(55) synthase trub | CPT03_RS14850 | Not Available | Positive | 3612475 - 3613200 | 26867.3 |
| yitt family protein | CPT03_RS14855 | Not Available | Positive | 3613203 - 3614066 | 31154.3 |
| bifunctional riboflavin kinase/fad synthetase | CPT03_RS14860 | Not Available | Positive | 3614078 - 3615013 | 35113.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

