Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CPT03_RS14765 | Not Available | Positive | 3589768 - 3591399 | 62055.8 |
| tonb-dependent receptor domain-containing protein | CPT03_RS14770 | Not Available | Negative | 3591623 - 3594031 | 87523.4 |
| llm class flavin-dependent oxidoreductase | CPT03_RS14775 | Not Available | Negative | 3594137 - 3595141 | 36605.6 |
| glycoside hydrolase family 43 protein | CPT03_RS14780 | Not Available | Positive | 3595263 - 3596792 | 57914.6 |
| fadr/gntr family transcriptional regulator | CPT03_RS14785 | Not Available | Positive | 3596844 - 3597545 | 26665.9 |
| alpha-l-fucosidase | CPT03_RS14790 | Not Available | Negative | 3597556 - 3599130 | 59488.1 |
| peroxiredoxin family protein | CPT03_RS14795 | Not Available | Negative | 3599208 - 3600440 | 45722.2 |
| nadp-dependent oxidoreductase | CPT03_RS14800 | Not Available | Negative | 3600514 - 3601449 | 32719.5 |
| response regulator | CPT03_RS14805 | Not Available | Negative | 3601689 - 3603266 | 57939.7 |
| nad-dependent epimerase/dehydratase family protein | CPT03_RS14810 | Not Available | Negative | 3603597 - 3604550 | 35933.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

