Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacillithiol biosynthesis cysteine-adding enzyme bshc | CPT03_RS14715 | Not Available | Positive | 3579900 - 3581486 | 60318.2 |
| ldh family oxidoreductase | CPT03_RS14720 | Not Available | Positive | 3581492 - 3582574 | 39024.7 |
| alpha-l-fucosidase | CPT03_RS14725 | Not Available | Negative | 3582569 - 3583996 | 54639.0 |
| signal peptidase i | CPT03_RS14730 | Not Available | Negative | 3584106 - 3585314 | 46442.6 |
| 4-hydroxy-tetrahydrodipicolinate reductase | CPT03_RS14735 | Not Available | Negative | 3585321 - 3586061 | 27624.9 |
| duf5683 domain-containing protein | CPT03_RS14740 | Not Available | Negative | 3586186 - 3586836 | 24298.1 |
| parb/repb/spo0j family partition protein | CPT03_RS14745 | Not Available | Negative | 3586836 - 3587759 | 34426.4 |
| para family protein | CPT03_RS14750 | Not Available | Negative | 3587771 - 3588574 | 29431.7 |
| nadph-dependent fmn reductase | CPT03_RS14755 | Not Available | Positive | 3588756 - 3589277 | 19385.4 |
| hypothetical protein | CPT03_RS14760 | Not Available | Negative | 3589264 - 3589722 | 17354.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

