Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | CPT03_RS14615 | Not Available | Negative | 3549375 - 3551129 | 65921.5 |
| rok family protein | CPT03_RS14620 | Not Available | Positive | 3551444 - 3552634 | 42986.6 |
| glycoside hydrolase family 125 protein | CPT03_RS14625 | Not Available | Negative | 3552716 - 3554131 | 53256.6 |
| gh92 family glycosyl hydrolase | CPT03_RS14630 | Not Available | Negative | 3554136 - 3556397 | 85824.0 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS14635 | Not Available | Negative | 3556563 - 3558206 | 61763.0 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS14640 | Not Available | Negative | 3558218 - 3561229 | 110615.0 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS14645 | Not Available | Negative | 3561885 - 3563438 | 57851.2 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS14650 | Not Available | Negative | 3563468 - 3566671 | 117132.0 |
| lipid-a-disaccharide synthase | CPT03_RS14655 | Not Available | Negative | 3567052 - 3568158 | 41320.6 |
| stationary phase survival protein sure | CPT03_RS14660 | Not Available | Negative | 3568155 - 3568424 | 10063.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

