Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS14565 | Not Available | Positive | 3541249 - 3541479 | 8739.3 |
| class d beta-lactamase | CPT03_RS14570 | Not Available | Positive | 3541558 - 3542367 | 31117.2 |
| hypothetical protein | CPT03_RS14575 | Not Available | Negative | 3543354 - 3544076 | 28157.3 |
| hypothetical protein | CPT03_RS14580 | Not Available | Negative | 3544506 - 3545015 | 19449.6 |
| hypothetical protein | CPT03_RS14585 | Not Available | Negative | 3545134 - 3545322 | 6543.15 |
| putative phage abortive infection protein | CPT03_RS23390 | Not Available | Negative | 3545979 - 3546284 | 11947.3 |
| Trna-ala | Not Available | Not Available | Positive | 3546499 - 3546575 | Not Available |
| duf2490 domain-containing protein | CPT03_RS14600 | Not Available | Positive | 3546787 - 3547494 | 27773.2 |
| head gin domain-containing protein | CPT03_RS14605 | Not Available | Positive | 3547533 - 3548273 | 25266.2 |
| serine hydrolase domain-containing protein | CPT03_RS14610 | Not Available | Positive | 3548273 - 3549370 | 41480.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

