Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redoxin domain-containing protein | CPT03_RS14520 | Not Available | Negative | 3529785 - 3530366 | 21422.6 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | CPT03_RS14525 | Not Available | Negative | 3530424 - 3532025 | 58495.0 |
| hypothetical protein | CPT03_RS22985 | Not Available | Negative | 3532045 - 3532404 | 13293.8 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS14530 | Not Available | Negative | 3532503 - 3535400 | 104440.0 |
| rok family protein | CPT03_RS14535 | Not Available | Negative | 3535521 - 3536708 | 43093.9 |
| new3 domain-containing protein | CPT03_RS14540 | Not Available | Positive | 3537086 - 3537943 | 30929.2 |
| abc transporter atp-binding protein | CPT03_RS14545 | Not Available | Positive | 3537949 - 3538896 | 35081.7 |
| abc transporter permease subunit | CPT03_RS14550 | Not Available | Positive | 3539028 - 3539897 | 32172.2 |
| hypothetical protein | CPT03_RS14555 | Not Available | Negative | 3540416 - 3540631 | 8547.73 |
| hypothetical protein | CPT03_RS14560 | Not Available | Negative | 3540950 - 3541144 | 7320.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

