Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS14410 | Not Available | Negative | 3498400 - 3500058 | 62465.7 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS14415 | Not Available | Negative | 3500076 - 3503267 | 116712.0 |
| hypothetical protein | CPT03_RS14425 | Not Available | Positive | 3504079 - 3504453 | 14329.4 |
| efflux rnd transporter periplasmic adaptor subunit | CPT03_RS14430 | Not Available | Positive | 3504614 - 3505699 | 40400.6 |
| efflux rnd transporter permease subunit | CPT03_RS14435 | Not Available | Positive | 3505727 - 3508894 | 115846.0 |
| tolc family protein | CPT03_RS14440 | Not Available | Positive | 3508887 - 3510320 | 53175.9 |
| hypothetical protein | CPT03_RS14445 | Not Available | Negative | 3510471 - 3511265 | 30866.5 |
| carboxypeptidase-like regulatory domain-containing protein | CPT03_RS14450 | Not Available | Negative | 3511274 - 3513979 | 99704.3 |
| tetratricopeptide repeat protein | CPT03_RS14455 | Not Available | Negative | 3514101 - 3514742 | 23984.3 |
| sensor histidine kinase | CPT03_RS14460 | Not Available | Negative | 3514753 - 3516135 | 51892.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

