Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | CPT03_RS01410 | Not Available | Positive | 369879 - 370403 | 19969.4 |
| zip family metal transporter | CPT03_RS01415 | Not Available | Negative | 370413 - 371138 | 26535.0 |
| phosphatase pap2 family protein | CPT03_RS01420 | Not Available | Negative | 371138 - 371701 | 21612.1 |
| class i sam-dependent methyltransferase | CPT03_RS01425 | Not Available | Negative | 371698 - 372429 | 28725.3 |
| phosphoglucosamine mutase | CPT03_RS01430 | Not Available | Positive | 372587 - 373975 | 49792.9 |
| cysteine desulfurase family protein | CPT03_RS01435 | Not Available | Positive | 373983 - 375131 | 42222.4 |
| gh92 family glycosyl hydrolase | CPT03_RS01440 | Not Available | Positive | 375308 - 377599 | 86239.3 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | CPT03_RS01445 | Not Available | Negative | 377665 - 378510 | 31288.3 |
| class ii fructose-bisphosphate aldolase | CPT03_RS01450 | Not Available | Positive | 378739 - 379818 | 39571.8 |
| gnat family n-acetyltransferase | CPT03_RS01455 | Not Available | Positive | 379907 - 380341 | 16640.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

