Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bama/tama family outer membrane protein | CPT03_RS14310 | Not Available | Positive | 3468681 - 3470999 | 87371.1 |
| yihy/virulence factor brkb family protein | CPT03_RS14315 | Not Available | Positive | 3471008 - 3472039 | 37564.1 |
| atp-binding protein | CPT03_RS14320 | Not Available | Negative | 3472051 - 3474171 | 80323.1 |
| dna topoisomerase iv subunit b | CPT03_RS14325 | Not Available | Negative | 3474291 - 3476204 | 72767.2 |
| apc family permease | CPT03_RS14330 | Not Available | Positive | 3476359 - 3477690 | 48073.9 |
| mfs transporter | CPT03_RS14335 | Not Available | Positive | 3477729 - 3479078 | 49892.1 |
| dead/deah box helicase | CPT03_RS14340 | Not Available | Positive | 3479185 - 3480495 | 48258.8 |
| acyl-coa desaturase | CPT03_RS14345 | Not Available | Negative | 3480839 - 3481570 | 29489.7 |
| phosphoheptose isomerase | CPT03_RS14350 | Not Available | Negative | 3481572 - 3482069 | 18832.1 |
| hypothetical protein | CPT03_RS14355 | Not Available | Negative | 3482165 - 3482755 | 22679.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

