Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pspc domain-containing protein | CPT03_RS14210 | Not Available | Negative | 3443063 - 3443743 | 25506.3 |
| sdr family oxidoreductase | CPT03_RS14215 | Not Available | Negative | 3443764 - 3444453 | 25191.1 |
| mlae family abc transporter permease | CPT03_RS14220 | Not Available | Positive | 3444613 - 3445347 | 26116.8 |
| abc transporter atp-binding protein | CPT03_RS14225 | Not Available | Positive | 3445344 - 3446096 | 28163.1 |
| class i sam-dependent methyltransferase | CPT03_RS14230 | Not Available | Positive | 3446106 - 3446990 | 33614.3 |
| hemin-degrading factor | CPT03_RS14235 | Not Available | Negative | 3447080 - 3448108 | 38608.4 |
| heme abc transporter atp-binding protein | CPT03_RS14240 | Not Available | Negative | 3448164 - 3448946 | 28939.4 |
| feccd family abc transporter permease | CPT03_RS14245 | Not Available | Negative | 3448947 - 3449993 | 36820.8 |
| heme/hemin abc transporter substrate-binding protein | CPT03_RS14250 | Not Available | Negative | 3450003 - 3450869 | 30468.2 |
| hmuy family protein | CPT03_RS14255 | Not Available | Negative | 3450941 - 3452023 | 38931.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

