Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | CPT03_RS14160 | Not Available | Positive | 3431903 - 3432655 | 26943.9 |
| mannonate dehydratase | CPT03_RS14165 | Not Available | Positive | 3432683 - 3433846 | 44147.0 |
| hypothetical protein | CPT03_RS14170 | Not Available | Positive | 3433914 - 3434099 | 7024.62 |
| glycoside hydrolase family 43 protein | CPT03_RS14175 | Not Available | Positive | 3434559 - 3435614 | 39971.8 |
| nudix domain-containing protein | CPT03_RS14180 | Not Available | Positive | 3435680 - 3436198 | 19489.5 |
| gfo/idh/moca family protein | CPT03_RS14185 | Not Available | Negative | 3436215 - 3437327 | 41028.2 |
| sensor histidine kinase | CPT03_RS14190 | Not Available | Positive | 3437475 - 3439463 | 75235.3 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | CPT03_RS14195 | Not Available | Negative | 3439423 - 3441417 | 74189.9 |
| rdd family protein | CPT03_RS14200 | Not Available | Negative | 3441467 - 3442087 | 23350.5 |
| liaf transmembrane domain-containing protein | CPT03_RS14205 | Not Available | Negative | 3442129 - 3443061 | 34489.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

