Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 31 protein | CPT03_RS14110 | Not Available | Negative | 3411726 - 3414575 | 108379.0 |
| two-component regulator propeller domain-containing protein | CPT03_RS14115 | Not Available | Negative | 3414700 - 3418833 | 156693.0 |
| gluconokinase | CPT03_RS14120 | Not Available | Negative | 3418833 - 3420290 | 53508.7 |
| putative oxidoreductase c-terminal domain-containing protein | CPT03_RS14125 | Not Available | Negative | 3420331 - 3421695 | 51325.6 |
| gfo/idh/moca family protein | CPT03_RS14130 | Not Available | Negative | 3421699 - 3423135 | 53099.0 |
| thua domain-containing protein | CPT03_RS14135 | Not Available | Negative | 3423165 - 3424031 | 32873.4 |
| pmoa family protein | CPT03_RS14140 | Not Available | Negative | 3424028 - 3425305 | 48582.0 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS14145 | Not Available | Negative | 3425312 - 3427129 | 68399.8 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS14150 | Not Available | Negative | 3427156 - 3430245 | 114536.0 |
| laci family dna-binding transcriptional regulator | CPT03_RS14155 | Not Available | Positive | 3430766 - 3431794 | 37855.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

